SUPERFAMILY 1.73 HMM library and genome assignments server

Domain assignment for gi|16131845|ref|NP_418443.1| from Escherichia coli K-12 subMG1655

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|16131845|ref|NP_418443.1|
Domain Number 1 Region: 901-1227
Classification Level Classification E-value
Superfamily Methionine synthase activation domain-like 2.11e-136
Family Methionine synthase SAM-binding domain 5.88e-12
Further Details:      
 
Domain Number 2 Region: 4-399
Classification Level Classification E-value
Superfamily Homocysteine S-methyltransferase 4.67e-123
Family Homocysteine S-methyltransferase 9.34e-06
Further Details:      
 
Domain Number 3 Region: 356-631
Classification Level Classification E-value
Superfamily Dihydropteroate synthetase-like 3.4e-90
Family Methyltetrahydrofolate-utiluzing methyltransferases 0.0046
Further Details:      
 
Domain Number 4 Region: 741-894
Classification Level Classification E-value
Superfamily Cobalamin (vitamin B12)-binding domain 9.58e-48
Family Cobalamin (vitamin B12)-binding domain 5.37e-08
Further Details:      
 
Domain Number 5 Region: 651-740
Classification Level Classification E-value
Superfamily Methionine synthase domain 6.93e-27
Family Methionine synthase domain 3.35e-06
Further Details:      
 

Protein sequence

External link(s) gi|16131845|ref|NP_418443.1|
Sequence length 1227
Comment homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent [Escherichia coli str. K-12 substr. MG1655]
Sequence
MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSK
PEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTA
RTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILI
ETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEA
LTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAQ
AGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVG
ERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLI
AGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAV
VVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQ
DFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG
QLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVN
KRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK
SARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDL
GVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPR
TPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKY
PRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRT
HVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQH
DDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYP
ACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQV
EDYARRKGMSVTEVERWLAPNLGYDAD
Download sequence
Identical sequences A7ZUN3 B1IUN3 B1XC18 B2N313 B3HEQ5 B7LAW1 P13009
gi|218697721|ref|YP_002405388.1| gi|89110740|ref|AP_004520.1| gi|157156072|ref|YP_001465512.1| gi|170021983|ref|YP_001726937.1| gi|238903072|ref|YP_002928868.1| gi|170083476|ref|YP_001732796.1|

Jump to [ Top of page · Domain architecture · Domain assignment details ]